Protein ZmOrphan230
ZmOrphan230 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan230
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmOrphan230

ZmOrphan230 is a protein in the Orphans family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00612PF13178
Zm00001eb047820_T001
Zm00001eb047820_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d032932DAPseq no logo sequence fimo position
Zm00001d032932DAPseq no logo sequence fimo position
Zm00001d032932ChIPseq no logo sequence fimo position
Zm00001d032932PChIPseq no logo sequence fimo position

Interactions where ZmOrphan230 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan230 is the target  
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There are 111 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb047820_T001 from maize genome v5

Amino Acid Sequence
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MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVAAAAAATEVARLTAADESHLSVSCCPVEEAAAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQAN
ATLRRMQALVDAQSRLRAQRARMLDADHATPPAAYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSC
SAAATESRERRLAEYYHHGGGGQCSPAPFLFAPDLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYM
ANTESSRAKVRSQSAPRQRTDAALERQPSRRRAQQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSEC
GSTSSVLTAATVGYCRSLVGFEVHRGHY

MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVAAAAAATEVARLTAADESHLSVSCCPVEEAAAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQAN
ATLRRMQALVDAQSRLRAQRARMLDADHATPPAAYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSC
SAAATESRERRLAEYYHHGGGGQCSPAPFLFAPDLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYM
ANTESSRAKVRSQSAPRQRTDAALERQPSRRRAQQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSEC
GSTSSVLTAATVGYCRSLVGFEVHRGHY

MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVAAAAAATEVARLTAADESHLSVSCCPVEEAAAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQAN
ATLRRMQALVDAQSRLRAQRARMLDADHATPPAAYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSC
SAAATESRERRLAEYYHHGGGGQCSPAPFLFAPDLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYM
ANTESSRAKVRSQSAPRQRTDAALERQPSRRRAQQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSEC
GSTSSVLTAATVGYCRSLVGFEVHRGHY

MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVAAAAAATEVARLTAADESHLSVSCCPVEEAAAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQAN
ATLRRMQALVDAQSRLRAQRARMLDADHATPPAAYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSC
SAAATESRERRLAEYYHHGGGGQCSPAPFLFAPDLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYM
ANTESSRAKVRSQSAPRQRTDAALERQPSRRRAQQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSEC
GSTSSVLTAATVGYCRSLVGFEVHRGHY

MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVAAAAAATEVARLTAADESHLSVSCCPVEEAAAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQAN
ATLRRMQALVDAQSRLRAQRARMLDADHATPPAAYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSC
SAAATESRERRLAEYYHHGGGGQCSPAPFLFAPDLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYM
ANTESSRAKVRSQSAPRQRTDAALERQPSRRRAQQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSEC
GSTSSVLTAATVGYCRSLVGFEVHRGHY

MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVAAAAAATEVARLTAADESHLSVSCCPVEEAAAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQAN
ATLRRMQALVDAQSRLRAQRARMLDADHATPPAAYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSC
SAAATESRERRLAEYYHHGGGGQCSPAPFLFAPDLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYM
ANTESSRAKVRSQSAPRQRTDAALERQPSRRRAQQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSEC
GSTSSVLTAATVGYCRSLVGFEVHRGHY

MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVAAAAAATEVARLTAADESHLSVSCCPVEEAAAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQAN
ATLRRMQALVDAQSRLRAQRARMLDADHATPPAAYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSC
SAAATESRERRLAEYYHHGGGGQCSPAPFLFAPDLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYM
ANTESSRAKVRSQSAPRQRTDAALERQPSRRRAQQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSEC
GSTSSVLTAATVGYCRSLVGFEVHRGHY

MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVAAAAAATEVARLTAADESHLSVSCCPVEEAAAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQAN
ATLRRMQALVDAQSRLRAQRARMLDADHATPPAAYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSC
SAAATESRERRLAEYYHHGGGGQCSPAPFLFAPDLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYM
ANTESSRAKVRSQSAPRQRTDAALERQPSRRRAQQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSEC
GSTSSVLTAATVGYCRSLVGFEVHRGHY

MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVAAAAAATEVARLTAADESHLSVSCCPVEEAAAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQAN
ATLRRMQALVDAQSRLRAQRARMLDADHATPPAAYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSC
SAAATESRERRLAEYYHHGGGGQCSPAPFLFAPDLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYM
ANTESSRAKVRSQSAPRQRTDAALERQPSRRRAQQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSEC
GSTSSVLTAATVGYCRSLVGFEVHRGHY

MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVAAAAAATEVARLTAADESHLSVSCCPVEEAAAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQAN
ATLRRMQALVDAQSRLRAQRARMLDADHATPPAAYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSC
SAAATESRERRLAEYYHHGGGGQCSPAPFLFAPDLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYM
ANTESSRAKVRSQSAPRQRTDAALERQPSRRRAQQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSEC
GSTSSVLTAATVGYCRSLVGFEVHRGHY

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF13178
PF00612
PF00612
PF13178
PF00612
PF13178
Hover here to show all domains

Nucleotide Sequence
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AGTGGTGATCCGATTCCGACCGACG...

GRMZM2G070673_T01 from maize genome v3


Related TFome: pUT6722

Amino Acid Sequence
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MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVAAAAAATEVARLTAADESHLSVSCCPVEEAAAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQAN
ATLRRMQALVDAQSRLRAQRARMLDADHATPPAAYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSC
SAAATESRERRLAEYYHHGGGGQCSPAPFLFAPDLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYM
ANTESSRAKVRSQSAPRQRTDAALERQPSRRRAQQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSEC
GSTSSVLTAATVGYCRSLVGFEVHRGHY

Nucleotide Sequence
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CTGGCCTGGGTGCTGCCTGCAGTGG...

Zm00001d032932_T001 from maize genome v4

Amino Acid Sequence
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MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVAAAAAATEVARLTAADESHLSVSCCPVEEAAAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQAN
ATLRRMQALVDAQSRLRAQRARMLDADHATPPAAYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSC
SAAATESRERRLAEYYHHGGGGQCSPAPFLFAPDLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYM
ANTESSRAKVRSQSAPRQRTDAALERQPSRRRAQQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSEC
GSTSSVLTAATVGYCRSLVGFEVHRGHY

Nucleotide Sequence
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GGTGGATGTTCGGAAGCAAGCTTTG...

Zm00001eb047820_T002 from maize genome v5

Amino Acid Sequence
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MGKAGRWLKSILAGRKSGVRDKALRHQQQQGDATPLPAASSPREKRRWSFRRPATAPTKQEGKANNAAPSPLSSLEPSAR
ELDQSEHAVRIQATFRGYLARKALCALRGLVKLQALVRGQLVRRQANATLRRMQALVDAQSRLRAQRARMLDADHATPPA
AYQRRSPHHPIPMRRSSYEAMDRSGEEHVKVVEMDAGDPARRGRSSCSAAATESRERRLAEYYHHGGGGQCSPAPFLFAP
DLSPQRGDSGHLEDVFAFDPAATARSSPYVAPYDDAADAYGVVPSYMANTESSRAKVRSQSAPRQRTDAALERQPSRRRA
QQGAPRKMQRSSSHVGVPAAAAYGYPAQPWAGVRLDRSSASLVGSECGSTSSVLTAATVGYCRSLVGFEVHRGHY

Nucleotide Sequence
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TTTCCTATCCTTCCCTTATCATCGG...


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